Scientific papers 2004-2006

Aagesen, L., Petersen, G. & Seberg, O. 2005. Sequence length variation, indel costs, and congruence in sensitivity analysis.– Cladistics 21: 15-30.

Asmussen, C.B., Dransfield, J. Deichmann, V., Barfod, A.S., Pintaud, J.-C. & Baker, W.J.  2006.  A new subfamily classification of the palm family (Arecaceae): Evidence from plastid DNA phylogeny.–  Bot. Journ. Linn. Soc. 151: 15-38.

Buzgo, M., Soltis, D.E., Soltis, P.S., Ma, H., Hauser, B.A., Leebens-Mack, J. & Johansen, B. 2006. Perianth Development in the Basal Monocot Triglochin maritima (Juncaginaceae).– Aliso 22: 107-125.

Chase, M.W., Fay, M. F., Devey, D., Maurin, O., Rønsted, N., Davies, J., Pillon, Y.,. Petersen, G., Seberg, O., Tamura, M. N., Asmussen, C. B.,  Hilu,  K.,  Borsch, T., Davis, J. I., Stevenson, D. W., Pires, J. C.,  Givnish, T. J., Graham, S. W.,  McPherson, M. M. & Rai,  H. S. 2006. Multi-gene analyses of monocot relationships: a summary. – Aliso 22: 63-75.

Cribb, P. & Rasmussen, F. N. 2005. Liparis – Synonomy, phylogenetics, taxonomic notes. – in Pridgeon, A., Chase, M., P. Cribb & F. N. Rasmussen (eds.): Genera Orchidacearum vol. 4: 465–472.– Oxford University Press, Oxford.

Cribb, P. & Rasmussen, F. N. 2005. Oberonia  – Synonomy, taxonomic notes. – in Pridgeon, A., Chase, M., P. Cribb & F. N. Rasmussen (eds.): Genera Orchidacearum vol. 4: 476–479.– Oxford University Press, Oxford.

Cribb, P. & Rasmussen, F. N. 2005. Stichorkis – Synonomy, taxonomic notes. – in Pridgeon, A., Chase, M., P. Cribb & F. N. Rasmussen (eds.): Genera Orchidacearum vol. 4. 484–487.– Oxford University Press, Oxford.

Cuenca, A. & Asmussen-Lange, C.B. (in press).  Phylogeny of the palm tribe Chamaedoreeae (Arecaceae) based on plastid DNA sequences.–  Syst. Bot. 32.

Davis, J.I, Stevenson, D.W., Petersen, G., Seberg, O., Campbell, L.M., Freudenstein, J.V., Goldman, D.H., Hardy, C.R., Michelangeli, F.A., Simmons, M.P., Specht, C.D., Vergara-Silva, F., and Gandolfo, M.A. 204. A phylogeny of the monocots, as inferred from rbcL and atpA sequence variation. – Syst. Bot. 29: 476-510.

Davis, J.I., Petersen, G., Seberg, O., Stevenson, D. W., Hardy, C. R., Simmons, M. P., Michelangeli, F. A., Goldman, D. H.,  Campbell, L. M.,  Specht, C. D. & Cohen, J. I.  2006. Are mitochondrial genes useful for the analysis of monocot relationships? – Taxon 55: 857-870.

Dransfield, J., Uhl, N.W., Asmussen, C.B., Baker, W.J., Harley, M.M. & Lewis, C.E.  2005.  An outline of a new phylogenetic classification of the palm Family, Arecaceae.–  Kew Bulletin 60: 559-569.

Enghoff, H. & Seberg, O. 2006. Taxonomy of taxonomy and taxonomists.– The Systematist 27: 13-15.

Fay, M.F., Chase, M. W., Rønsted, N., Devey, D. S.,  Pillon, Y., Pires,  J. C,  Petersen, G. Seberg O. & Davis, J. I. 2006. Phylogenetics of Liliales: summarized evidence from combined analyses of five plastid and one mitochondrial loci. – Aliso 22: 559–565.

Frederiksen, S. DASYPYRUM (Coss. & Durieu) (in press) in Durand, T., Barkworth, M.E., Capels, K.M. and Anderton L.K. (eds.) Magnoliophyta: Commelinidae (in part): Poaceae, part 1. Flora of North America north of Mexico, volume 24.–Oxford University Press, New York.

Frederiksen, S. EREMOPYRUM (Ledeb.) Jaub. & Spach. (in press) in Durand, T., Barkworth, M.E., Capels, K.M. and Anderton L.K., eds. Magnoliophyta: Commelinidae (in part): Poaceae, part 1. Flora of North America north of Mexico, volume 24.– Oxford University Press, New York.

Jahren, A.H., Petersen, G. & Seberg, O. 2004. Plant DNA: A new substrate for carbon stable isotope analysis and a potential paleoenvironmental indicator. – Geology 32: 241-244.

Jahren, A.H., Kelm, K., Wendland, B., Petersen, G. & Seberg, O. 2006. Carbon stable isotope composition of DNA isolated from an incipient paleosol. – Geology 34: 381-384.

Johansen, B., Frederiksen, S. & Skipper, M. 2006. Molecular development of petaloid Monocot flowers.– Aliso 22:151-158.

Kjær, A., A. Barfod, Asmussen, C. B. & Seberg, O. 2004. Investigation of Genetic and Morphological Variation in the sago palm (Metroxylon sagu, Arecaceae) in Papua New Guinea. – Ann. Bot. 94: 109-117.

Kristiansen, K. A., Cilieborg, M., Drábková, L., Jørgensen, T., Petersen, G. & Seberg, O. 2005. DNA Taxonomy – the Riddle of Oxychloë (Juncaceae).– Syst. Bot. 30: 284-289.

Kristiansen, K.A., Freudenstein, J. V., Rasmussen F. N., & Rasmussen H. N. 2004: Molecular identification of mycorrhizal fungi in Neuwiedia veratrifolia (Orchidaceae).– Molec. Phyl. Evol. 33: 251-258.

Pedersen, L.B. and Johansen, B. 2004. The anatomy of the stigma of Orchidantha (Lowiaceae).– Amer. J. Bot. 91: 299-305.

Petersen, O. & Seberg, O. 2004. On the Origin of the Tetraploid Species Hordeum capense and H. secalinum (Poaceae).– Syst. Bot. 29: 862-873.

Petersen, G., Seberg, O., Aagesen, L. & Frederiksen, S. 2004. An Empirical Test of the Treatment of Indels During Optimization Alignment Based on the Phylogeny of the Genus Secale (Poaceae). – Molec. Phyl. Evol. 30: 733-742.

Petersen, G., Seberg O. & Baden, C. 2004. A phylogenetic analysis of the genus Psathyrostachys (Poaceae) basen on one nuclear, three plastid genes, and morphology.– Pl. Syst. Evol. 249: 99-110.

Petersen, G. & Seberg, O. 2005. Phylogenetic Analysis of Allopolyploid Species.–  Czech. J. Genet. Plant Breed. 41, Special Issue: 28-37

Petersen, G., Seberg, O., Yde M. & Berthelsen, K. 2006. Phylogenetic relationships of Triticum and Aegilops and evidence for the origin of the A, B, and D genomes of common wheat (Triticum aestivum).– Molec. Phyl. Evol. 39: 70-82.

Petersen, G., Seberg, O., Davis, J. I. & Stevenson, D. W. 2006. RNA editing and phylogenetic reconstuction in two monocot mitochondrial genes.– Taxon 55: 871-886.

Petersen, G., Seberg, O., Davis, J. I.,  Goldman, D. H., Stevenson, D. W., Campbell, F L. Michelangeli, M.. A., Specht, C..D., Chase, M. W.,  Fay, M. F., Pires, J. C., Freudenstein, J. V.,  Hardy, C. R. & Simmons, M. P. 2006. Mitochondrial data in monocot phylogenetics. – Aliso 22: 52–62.

Pires, J.C., Maureira, I. J., Givnish, T. J., Sytsma, K. J., Seberg, O., Petersen, G., Davis, J. I., Stevenson, D. W., Rudall, P. J., Fay  M. F., & Chase M. W. 2006. Phylogeny, genome size, and chromosome evolution of Asparagales.– Aliso 22: 287–304.

Pridgeon, A., Chase, M. W., Cribb, P. & Rasmussen, F. N. (eds.) 2005: Genera Orchidacearum vol. 4, Epidendroideae (Part one): 1–672.– Oxford University Press.

Rasmussen, F. N. 2005 Tropidieae. – Pp. 619–625 in Pridgeon, A., Chase, M W., Cribb, P. & Rasmussen, F. N. (eds.) 2005: Genera Orchidacearum vol. 4.– Oxford University Press, Oxford.

Rasmussen, F. N. 2005. Glossary. – Pp. 629–630 in Pridgeon, A., Chase, M. W., Cribb, P. & Rasmussen, F. N. (eds.) 2005: Genera Orchidacearum vol. 4. – Oxford University Press, Oxford.

Rasmussen, F. N. & Johansen, B. 2006: Carpology of orchids.– Selbyana 27: 44–53.

Rasmussen, F. N., Frederiksen, S., Johansen, B., Jørgensen, L. B., Petersen, G. & Seberg, O. 2006. Fleshy fruits in liliiflorous monocots.– Aliso 22: 135-147.

Roncal, J., Francisco-Ortega, J., Asmussen, C.B. & Lewis, C.E..  2005.  Molecular phylogenetics of tribe Geonomeae (Arecaceae) using nuclear DNA sequences of phosphoribulokinase and RNA polymerase II. – Syst. Bot. 30: 275: -283.

Rothacker, E.  and Rasmussen, F. N. 2005. Triphorae. – Pp. 607–618 in Pridgeon, A., Chase, M., Cribb, P. & Rasmussen, F. N. (eds.): Genera Orchidacearum vol. 4.–  Oxford University Press, Oxford.

Sannier, J., Forchioni, A., Asmussen-Lange, C.B., Harley, M. & Nadot, S. (in press).  Evolution of the microsporogenesis in palms (Arecaceae).–  Int. Journ. Pl. Sci.

Seberg, O. 2004. The Future of Systematics: Assembling the Tree of Life.– The Systematist 23: 2-8.

Seberg, O. 2005. The Triticeae – a Branch in the Tree of Life.– The Natural History Museum of Denmark, Copenhagen.

Seberg, O. & Petersen, G. 2006. Mitochondrial DNA Sequences in Plant Phylogenetics and Evolution – Symposium at XVII IBC, Vienna, Austria.– Taxon 55: 833-835.

Seberg, O. & Petersen, G. 2007. Assembling the Tree of Life – Magnitude, shortcuts, and pitfalls. Pp, 33-46 in Hodkinson T.R. & Parnell J.A.N. (eds.) Reconstructing the tree of life: taxonomy and systematics of species rich groups.–  Systematics Association Special Volume Series 72.

Seberg, O. & Petersen, G. (in press). Phylogeny of the Triticeae (Poaceae) – based on three organelle genes, two single-copy nuclear genes, and morphology. – Aliso 23: 389-348.

Skipper, M., Johansen, L.B., Pedersen, K.B., Frederiksen, S. & Johansen, B.B. 2006. Cloning and transcription analysis of an AGAMOUS- and SEEDSTICK ortholog in the ordhid Dendrobium thyrsiflorum (Reichb. F.). – Gene 366: 266-274.

Skipper, M., Pedersen, K.B., Johansen, L.B., Frederiksen, S., Irish, V.F. & Johansen, B.B. 2005. Identification and quantification of expression levels of three FRUITFULL-like MADS box genes from the orchid Dendrobium  thyrsiflorum. –Pl. Sci. 169: 579-586.

Trénel, P., Gustafsson, M.H.G., Baker, W.J., Asmussen Lange, C.B., Dransfield , J. & Borchsenius, F. (in press). Mid-Tertiary dispersal, not Gondwanan vicariance explains distribution patterns in the wax palm subfamily (Ceroxyloideae: Arecaceae).– Mol. Phylo. Evol.

Popular science

Asmussen, C.B.  2005.  Den nye nordiske flora (boganmeldelse).– Urt 29: 78-80.

Damgaard, J., Petersen, G. & Seberg, O. 2004: Livet skal sættes på stregkode.– Aktuel Naturvidenskab 6: 22-25.

Damgaard, J., Petersen, G. & Seberg, O. 2005. Livet skal sættes på stregkode. Morgenavisen Jyllands-Posten 15. maj 2005: 10.

Demissew, S., Cribb, P. &  Rasmussen, F. N. 2004: Field Guide to Ethiopian orchids.– Royal Botanic Gardens, Kew.

Frederiksen, S., Rasmussen, F. N. & Seberg, O. (red.) 2006. Dansk flora. – Gyldendal, København.

Frederiksen, S. 2006. Hydrocharitaceae,Najadaceae, Ruppiaceae, Zosteraceae, Poaceae, Sparganiaceae, Typhaceae, Nymphaeaceae, Aristolochiaceae, Ceratophyllaceae, Caryophyllaceae, Plumbaginaceae, Haloragaceae, Lythraceae, Onagraceae, Curcurbitaceae, Rosaceae (delvis), Cistaceae, Polemoniaceae, Boraginaceae, Plantaginaceae, Callitrichaceae, Hippuridaceae in Frederiksen, S., Rasmussen, F. N. & Seberg. (eds.) Dansk flora, Gyldendal. (a total of 129 pages).

Frederiksen, S., Rasmussen, F. N. & Seberg, O. 2006. Danske plantenavne.– Urt 30: 118-125.

Frederiksen, S. & Seberg, O. 2006. Specialnøgle til vandplanter, Specialnøgle til vedplanter. in Frederiksen, S., Rasmussen, F. N. & Seberg. (eds.) Dansk flora, Gyldendal. (a total of 16 pages).

Frederiksen, S., Rasmussen, F. N. & Seberg, O. 2006. Dækfrøede planter in Frederiksen, S., Rasmussen, F. N. & Seberg. (eds.) Dansk flora, Gyldendal. (a total of 21 pages).

Frederiksen, S. & Seberg, O. 2007. Hvorfor ændres klassifikationer?– Urt 31: 36-45.

Heywood, V. H., Brummit, R. K., Culham, A. & Seberg O. 2007. Flowering Plant Families of the World. – Kew Publishing, London.

Johansen, B.B. 2006. Papaveraceae, Berberidaceae, Alismataceae, Butomaceae, Juncaginaceae, Scheuchzeriaceae in Frederiksen, S., Rasmussen, F. N. & Seberg. (eds.) Dansk flora, Gyldendal. (a total of 11 pages).

Lange, C.B.A.  2006.  Fabaceae  in  Frederiksen, S., Rasmussen, F.N. & Seberg, O. (eds.): Dansk Flora, Gyldendal. (a total of 19 pages).

Larsen, A.S., Asmussen, C.B., Coart, E., Olrik, D.C., Kjær, E.D.  2006.  Hybridization and genetic variation in Danish populations of European crab apple (Malus sylvestris).– Tree Genetics & Genomes 2: 86-97.

Larsen, A.S., Kjær, E.D., Lange, C.B.A.  2006.  Når landskabets vilde – og knap så vilde – æbletræer mødes.  Årbog for Fonden for Træer og Miljø.– Fonden for Træer og Miljø, pp., 27-34.

Petersen, G. 2006. Acoraceae, Araceae, Iridaceae, Anthericaceae, Hyacinthaceae, Asparagaceae, Alliaceae, Amaryllidaceae, Natheciaceae, Trilliaceae, Liliaceae.  in: Frederiksen, S., Rasmussen, F.N. & Seberg, O. (eds.): Dansk flora. Gyldendal. (a total of 19 pages).

Seberg, O. 2006. Hvad nytter naturhistorien? –”Kronik” in “Politiken”.

Seberg, O. 2006. Alchemilla, Apocynaceae, Chenopodiaceae, Cyperaceae, Euphorbiaceae, Potamogentonaceae og Rosa. in Frederiksen, S., F. N. Rasmussen & O. Seberg (eds.) Dansk flora. – Gyldendal, København. (a total of 67 pages).